All columns containing multiple phenotypes are split into multiple columns, one for each single phenotype.

split_phenotypes(csd)

Arguments

csd

Cell seg data to use.

Value

A new data frame with Phenotype and Phenotype-<scheme> columns replaced with individual columns per phenotype and the Confidence column(s) removed.

Details

Multiple phenotypes in the original column must be separated with "/". The names of positive phenotypes must end in "+".